NEWT is the taxonomy database maintained by the UniProt group. It integrates taxonomy data compiled in the NCBI database and data specific to the UniProt Knowledgebase. [Reference]. Species with protein sequences stored in the UniProt Knowledgebase are named according to UniProt nomenclature [Guide to organism denomination]. We endeavour to maintain a list of manually curated species names for which protein ...
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Taxonomy : NEWT is the taxonomy database maintained by the UniProt
Facts from the Community
From the Bio2RDF Semantic knowledge map base
Reserved namespace:
- taxonomy
Description:
- The taxonomy database of the International Sequence Database Collaboration contains the names of all organisms that are represented in the sequence databases with at least one nucleotide or protein sequence.
Provider homepage:
- http://beta.uniprot.org/taxonomy/
Is replaced by:
Triple number:
- 4,759,509
Number of triples:
- 3,877,201
SPARQL point:
- http://taxonomy.bio2rdf.org/sparql
SPARQL port number:
- 8,932