Gene Group Filter Gene Group topics

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table started by druderman for the Biology Commons
A gene group specifies a curated collection of genes which possess common characteristics.  Examples of such characteristics are genomic proximity, function of protein product, and dysregulation in disease.
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x mitochondrion inheritance        
x mitochondrial genome maintenance   Traceable Author Statement solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4  
Traceable Author Statement endothelial cell growth factor 1 (platelet-derived)
Inferred from Mutant Phenotype MpV17 mitochondrial inner membrane protein
x reproduction   Inferred from Expression Pattern matrix metallopeptidase 23B  
x low-affinity zinc ion transporter activity        
x high affinity zinc uptake transporter activity        
x alpha-1,6-mannosyltransferase activity        
x vacuole inheritance        
x trans-hexaprenyltranstransferase activity   Inferred from Direct Assay prenyl (decaprenyl) diphosphate synthase, subunit 1  
Inferred from Direct Assay prenyl (decaprenyl) diphosphate synthase, subunit 2
x single-stranded DNA specific endodeoxyribonuclease activity   Traceable Author Statement MRE11 meiotic recombination 11 homolog A (S. cerevisiae)  
Traceable Author Statement RAD50 homolog (S. cerevisiae)
x single strand break repair   Traceable Author Statement ligase IV, DNA, ATP-dependent  
Inferred from Direct Assay transition protein 1 (during histone to protamine replacement)
Inferred from Electronic Annotation X-ray repair complementing defective repair in Chinese hamster cells 1
Inferred from Direct Assay aprataxin
x lactase activity   Traceable Author Statement lactase  
x phosphopyruvate hydratase complex   Inferred from Electronic Annotation enolase 1, (alpha)  
Inferred from Electronic Annotation enolase 1, (alpha) pseudogene
Inferred from Electronic Annotation enolase 2 (gamma, neuronal)
Inferred from Electronic Annotation enolase 3 (beta, muscle)
Inferred from Electronic Annotation enolase alpha, lung-specific
x regulation of DNA recombination   Traceable Author Statement interleukin 7 receptor  
Traceable Author Statement karyopherin alpha 1 (importin alpha 5)
Traceable Author Statement karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
Inferred from Expression Pattern SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1
x alpha-glucoside transport        
x regulation of mitotic recombination   Traceable Author Statement MRE11 meiotic recombination 11 homolog A (S. cerevisiae)  
Traceable Author Statement RAD50 homolog (S. cerevisiae)
x maltose biosynthetic process        
x maltose catabolic process        
x mitotic spindle elongation   Traceable Author Statement protein regulator of cytokinesis 1  
Traceable Author Statement kinesin family member 23
x maltose metabolic process        
x ribosomal small subunit assembly and maintenance   Inferred from Sequence or Structural Similarity ribosomal protein S14  
x mannosyltransferase activity   Inferred from Direct Assay phosphatidylinositol glycan anchor biosynthesis, class B  
Inferred from Electronic Annotation asparagine-linked glycosylation 3 homolog (S. cerevisiae, alpha-1,3-mannosyltransferase)
Inferred from Electronic Annotation protein-O-mannosyltransferase 1
Inferred from Electronic Annotation protein-O-mannosyltransferase 2
x alpha-1,2-mannosyltransferase activity   Inferred from Mutant Phenotype phosphatidylinositol glycan anchor biosynthesis, class Z  
x ribosomal large subunit assembly and maintenance        
x alpha-1,3-mannosyltransferase activity        
x adenine deaminase activity        
x mannosylphosphate transferase activity        
x cell wall mannoprotein biosynthetic process        
x acyl carrier activity   Inferred from Electronic Annotation NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa  
x very-long-chain fatty acid metabolic process   Inferred from Direct Assay acyl-CoA thioesterase 2  
Traceable Author Statement solute carrier family 27 (fatty acid transporter), member 5
Traceable Author Statement solute carrier family 27 (fatty acid transporter), member 2
Inferred from Direct Assay acyl-CoA synthetase bubblegum family member 1
Traceable Author Statement solute carrier family 27 (fatty acid transporter), member 6
more ▼ more ▼
x acyl binding        
x protein targeting to Golgi   Inferred from Mutant Phenotype optineurin  
Inferred from Electronic Annotation phosphofurin acidic cluster sorting protein 1
x transition metal ion transport        
x low affinity iron ion transport        
x autophagic vacuole fusion        
x autophagic vacuole formation   Inferred from Electronic Annotation ATG12 autophagy related 12 homolog (S. cerevisiae)  
Inferred from Electronic Annotation ATG5 autophagy related 5 homolog (S. cerevisiae)
Inferred from Sequence or Structural Similarity ATG4 autophagy related 4 homolog B (S. cerevisiae)
Inferred from Mutant Phenotype ATG9 autophagy related 9 homolog A (S. cerevisiae)
Inferred from Sequence or Structural Similarity microtubule-associated protein 1 light chain 3 alpha
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x ascorbate stabilization        
x urea cycle intermediate metabolic process        
x urea cycle   Inferred from Electronic Annotation arginase, liver  
Inferred from Electronic Annotation arginase, type II
Inferred from Electronic Annotation argininosuccinate lyase
Traceable Author Statement argininosuccinate synthetase 1
Inferred from Electronic Annotation carbamoyl-phosphate synthetase 1, mitochondrial
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x tRNA binding   Traceable Author Statement alanyl-tRNA synthetase  
Traceable Author Statement cysteinyl-tRNA synthetase
Non-traceable Author Statement lysyl-tRNA synthetase
Inferred from Electronic Annotation methionine-tRNA synthetase
Inferred from Electronic Annotation ribosomal protein L35a
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x peptidyltransferase activity        
x ribosomal large subunit export from nucleus        
x ribosome export from nucleus        
x argininosuccinate metabolic process        
x citrulline metabolic process        
x acyl-CoA binding   Inferred from Electronic Annotation diazepam binding inhibitor (GABA receptor modulator, acyl-Coenzyme A binding protein)  
Inferred from Sequence or Structural Similarity aldehyde dehydrogenase 6 family, member A1
Inferred from Electronic Annotation peroxisomal D3,D2-enoyl-CoA isomerase
Traceable Author Statement acyl-CoA thioesterase 7
Inferred from Electronic Annotation acyl-Coenzyme A binding domain containing 3
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x L-ornithine transporter activity   Traceable Author Statement solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15  
Non-traceable Author Statement solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2
x mitochondrial ornithine transport   Traceable Author Statement solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15  
Non-traceable Author Statement solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2
x ribosomal small subunit export from nucleus        
x protein import into nucleus, docking   Inferred from Electronic Annotation CSE1 chromosome segregation 1-like (yeast)  
Inferred from Electronic Annotation karyopherin (importin) beta 1
Inferred from Electronic Annotation transportin 1
Inferred from Electronic Annotation RAN binding protein 5
Non-traceable Author Statement nucleoporin 98kDa
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x protein import into nucleus, translocation   Inferred from Mutant Phenotype v-akt murine thymoma viral oncogene homolog 1  
Not Recorded aryl hydrocarbon receptor nuclear translocator
Non-traceable Author Statement ATPase, H+ transporting, lysosomal accessory protein 1
Inferred from Mutant Phenotype B-cell CLL/lymphoma 3
Non-traceable Author Statement fibroblast growth factor 10
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x protein import into nucleus, substrate release        
x regulation of progression through cell cycle   Traceable Author Statement Abl gene  
Traceable Author Statement acid phosphatase, prostate
Non-traceable Author Statement actinin, alpha 4
Traceable Author Statement ras homolog gene family, member G (rho G)
Traceable Author Statement AXL receptor tyrosine kinase
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x cell cycle checkpoint   Traceable Author Statement ataxia telangiectasia and Rad3 related  
Non-traceable Author Statement BRCA1
Traceable Author Statement cyclin G2
Traceable Author Statement cyclin-dependent kinase inhibitor 2A (melanoma, p16, inhibits CDK4)
Traceable Author Statement Fanconi anemia, complementation group G
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x DNA replication checkpoint   Traceable Author Statement cell division cycle 6 homolog (S. cerevisiae)  
Traceable Author Statement RAD9 homolog A (S. pombe)
Traceable Author Statement RAD17 homolog (S. pombe)
Traceable Author Statement CDC45 cell division cycle 45-like (S. cerevisiae)
Inferred from Direct Assay chromatin licensing and DNA replication factor 1
x DNA damage checkpoint   Traceable Author Statement CHK1 checkpoint homolog (S. pombe)  
Traceable Author Statement checkpoint suppressor 1
Inferred from Electronic Annotation mitogen-activated protein kinase 14
Traceable Author Statement HUS1 checkpoint homolog (S. pombe)
Inferred from Direct Assay nibrin
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x mitotic sister chromatid segregation   Traceable Author Statement DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)  
Non-traceable Author Statement kinesin family member C1
Traceable Author Statement kinesin family member 25
Inferred from Electronic Annotation MAD2 mitotic arrest deficient-like 1 (yeast)
Inferred from Electronic Annotation NIMA (never in mitosis gene a)-related kinase 2
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x M phase specific microtubule process   Inferred from Electronic Annotation crystallin, alpha A  
Traceable Author Statement karyopherin alpha 2 (RAG cohort 1, importin alpha 1)
x spindle pole body separation        
x S phase of mitotic cell cycle   Traceable Author Statement DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 11 (CHL1-like helicase homolog, S. cerevisiae)  
Inferred from Direct Assay polymerase (DNA directed), alpha 1
Inferred from Direct Assay polymerase (DNA directed), delta 1, catalytic subunit 125kDa
Traceable Author Statement CDK2-associated protein 1
x G1/S-specific transcription in mitotic cell cycle   Traceable Author Statement growth factor independent 1  
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