ProDom : A protein domain database

ProDom is a comprehensive database of protein domain families generated from the global comparison of all available protein sequences. Recent improvements include the use of three-dimensional (3D) information from the SCOP database; a completelyredesigned web interface (http://www.toulouse.inra.fr/prodom.html); visualization of ProDom domains on 3D structures; coupling of ProDom analysis with the Geno3D homology modelling server; Bayesian inferen... more

ProDom is a comprehensive database of protein
domain families generated from the global comparison
of all available protein sequences. Recent
improvements include the use of three-dimensional
(3D) information from the SCOP database; a completely
redesigned web interface (http://www.
toulouse.inra.fr/prodom.html); visualization of
ProDom domains on 3D structures; coupling of
ProDom analysis with the Geno3D homology modelling
server; Bayesian inference of evolutionary
scenarios for ProDom families. In addition, we have
developed ProDom-SG, a ProDom-based server
dedicated to the selection of candidate proteins for
structural genomics. less